• Comparison of four ChIP-Seq analytical algorithms using rice endosperm H3K27 trimethylation profiling data. 

      Malone, Brandon M.; Tan, Feng; Bridges, Susan M.; Peng, Zhaohua (Public Library of ScienceDepartment of Computer Sciences and EngineeringDepartment of Biochemistry and Molecular BiologyJames Worth Bagley College of EngineeringCollege of Agriculture and Life Sciences, 9/30/2011)
      Chromatin immunoprecipitation coupled with high throughput DNA Sequencing (ChIP-Seq) has emerged as a powerful tool for genome wide profiling of the binding sites of proteins associated with DNA such as histones and ...
    • Fecal near infrared spectroscopy to discriminate physiological status in giant pandas. 

      Wiedower, Erin E.; Kouba, Andrew J.; Vance, Carrie K.; Hansen, Rachel L.; Stuth, Jerry W.; Tolleson, Douglas R. (Public Library of ScienceDepartment of Biochemistry and Molecular BiologyCollege of Agriculture and Life Sciences, 6/13/2012)
      Giant panda (Ailuropoda melanoleuca) monitoring and research often require accurate estimates of population size and density. However, obtaining these estimates has been challenging. Innovative technologies, such as fecal ...
    • Global analysis of lysine acetylation suggests the involvement of protein acetylation in diverse biological processes in rice (Oryza sativa). 

      Nallamilli, Babi Ramesh Reddy; Edelmann, Mariola J.; Zhong, Xiaoxian; Tan, Feng; Mujahid, Hana; Zhang, Jian; Nanduri, Bindu; Peng, Zhaohua (Public Library of ScienceDepartment of Biochemistry and Molecular BiologyCollege of Agriculture and Life SciencesInstitute for Genomics, Biocomputing and Biotechnology, 2/20/2014)
      Lysine acetylation is a reversible, dynamic protein modification regulated by lysine acetyltransferases and deacetylases. Recent advances in high-throughput proteomics have greatly contributed to the success of global ...
    • Proteome and membrane fatty acid analyses on Oligotropha carboxidovorans OM5 grown under chemolithoautotrophic and heterotrophic conditions. 

      Paul, Debarati; Kumar, Ranjit; Nanduri, Bindu; French, Todd; Pendarvis, Ken; Brown, Ashli; Lawrence, Mark L.; Burgess, Shane C. (Public Library of ScienceDepartment of Chemical EngineeringDepartment of Biochemistry and Molecular BiologyCollege of Veterinary MedicineJames Worth Bagley College of EngineeringCollege of Agriculture and Life SciencesLife Sciences and Biotechnology Institute, 2/28/2011)
      Oligotropha carboxidovorans OM5 T. (DSM 1227, ATCC 49405) is a chemolithoautotrophic bacterium able to utilize CO and H(2) to derive energy for fixation of CO(2). Thus, it is capable of growth using syngas, which is a ...